Publications

Cao, B., Hadavi, D., Cillero-Pastor, B., & Honing, M. (2026). Application of surface plasmon resonance to elucidate the cooperative DNA binding mechanisms of NFATc1 and c-Jun. Biochimica et Biophysica Acta-general Subjects, 1870(6), Article 130924. https://doi.org/10.1016/j.bbagen.2026.130924

Dost, A. F. M., Balazova, K., Pou Casellas, C., van Rooijen, L. M., Epskamp, W., van Son, G. J. F., van de Wetering, W. J., Lopez-Iglesias, C., Begthel, H., Peters, P. J., Smakman, N., van Es, J. H., & Clevers, H. (2026). Interferon-? selectively promotes survival of alveolar progenitor cells in a human lung organoid model. The Embo Journal, 45(10), 3364-3395. https://doi.org/10.1038/s44318-026-00774-4

Iannone, M., Loomans, T., Gorremans, S., Grajchen, E., Deneubourg, C., Hrupka, B., Ver Donck, L., Bretteville, A., Moechars, D., Vreeken, R. J., & Jahouh, F. (2026). A sensitive LC-MS/MS method for the simultaneous quantification of hexosylceramides and hexosylsphingosines, their precursors and metabolites in cells, plasma, and tissue homogenates. Analytical and Bioanalytical Chemistry, 418(12), 3791-3806. https://doi.org/10.1007/s00216-026-06485-3

Krijnen, K., Bohm, S., Hohndorf, J., Heeren, R. M. A., & Anthony, I. G. M. (2026). Integrating Ion Beam Control into a Commercial Platform for Improved Multimodal SIMS/MALDI Imaging. Journal of the American Society for Mass Spectrometry, 37(4), 902-909. https://doi.org/10.1021/jasms.5c00423

Ponsaerts, L., Alders, L., Schepers, M., Kemps, H., Pirlet, E., Willems, E., De Bondt, M., Jacobs, R., Brullo, C., Bruno, O., Fedele, E., Ricciarelli, R., Prickaerts, J., Somers, V., Vandenbosch, M., Vanmierlo, T., & Bronckaers, A. (2026). Prophylactic PDE4 and PDE4B inhibition reduce lesion size and neutrophil infiltration following ischemic stroke in male mice. Journal of Cerebral Blood Flow and Metabolism, 46(4), 896-912. https://doi.org/10.1177/0271678X251386237

Nieste, N., Olde Damink, S. W. M., Heeren, R. M. A., Cuypers, E., & Bouwense, S. A. W. (2026). Mass spectrometry imaging in spatial biology of pancreatic cancer. Analyst, 151(7), 1861-1880. https://doi.org/10.1039/d5an01264c

Dey, S., Cao, J.-H., Balluff, B., Mazza, G., Ashwin, H., Gilbert, L., James, S., Dowle, A. A., Calder, G., Dey, N. S., O'Toole, P., Heeren, R. M. A., & Kaye, P. M. (2026). Ontogeny independent expression of LPCAT2 in granuloma macrophages during experimental visceral leishmaniasis. Communications Biology, 9(1), Article 641. https://doi.org/10.1038/s42003-026-09904-4

Kuligowski, J., Bertrand-Michel, J., Cazenave-Gassiot, A., Goracci, L., Domingues, P., Oresic, M., Thorsteinsdottir, M., Gruber, F., Willighagen, E. L., Spickett, C. M., Ruskovska, T., O'donnell, V. B., Prabutzki, P., Petrovic, S., Godzien, J., Tortorella, S., Reis, A., Dias, I. H. K., Schleyer, G., ... Fedorova, M. (2026). Outcomes and future activities of the 'Pan-European network in Lipidomics and EpiLipidomics - EpiLipidNET'. Metabolomics, 22(2), Article 42. https://doi.org/10.1007/s11306-026-02396-7

Kuik, C., Seccaroni, M., Freulings, K., Pressanto, M. C., Sforna, M., Bordoni, M., Calzoni, E., Emiliani, C., Pepe, M., Cillero-Pastor, B., & Chiaradia, E. (2026). Dysregulated Lipid and Protein Networks in Osteochondrosis. Journal of Proteome Research, 25(3), 1453-1464. https://doi.org/10.1021/acs.jproteome.5c00774

Hofstraat-Boersma, R., Marx, K., Blatnik, R., Claessen, N., Chojnacka, A., Peters-Sengers, H., Florquin, S., Kers, J., & Corthals, G. (2026). Highly Repeatable Tissue Proteomics for Kidney Transplant Pathology: Technical and Biological Validation of Protein Analysis Using Liquid Chromatography-Tandem Mass Spectrometry/Mass Spectrometry (LC-MS/MS). Laboratory Investigation, 106(3), Article 106073. https://doi.org/10.1016/j.labinv.2026.106073

Celikkin, N., Tirelli, M. C., Maiullari, F., Cisneros, C. G., Kaushik, V., Volpi, M., Aerts, A., Mohren, R., Vandenbosch, M., Cardinaels, R., Mignon, A., & Costantini, M. (2026). Methacrylated pulmonary dECM-enriched GelMA bioinks promote endothelialization and angiogenesis in 3D printed tubular constructs. Materials Advances, 7(4), 2195-2206. https://doi.org/10.1039/d5ma00860c

Wang, D., Lim, S., Van De Wetering, W. J., Lopez-Iglesias, C., Okura, Y., Teranishi-Ikawa, Y., Mizoroki, A., Spoelstra, W. K., Dayton, T., Van Son, G. J. F., Pronk, A., Smakman, N., Gonera-de Jong, G. B. C., Withoff, S., Jonkers, I. H., Van Zon, J. S., Tans, S. J., Peters, P. J., Van Es, J. H., & Clevers, H. (2026). Human gut M cells resemble dendritic cells and present gluten antigen. Nature, 650(8100), 251-260. https://doi.org/10.1038/s41586-025-09829-8

Iannone, M., Vereyken, L., Grajchen, E., Deneubourg, C., Gorremans, S., Ver Donck, L., Bretteville, A., Moechars, D., Jahouh, F., & Vreeken, R. J. (2026). Development and validation of a robust UPLC-MS/MS method for the analysis of polyamines in cells, biofluids and tissues. Journal of Pharmaceutical and Biomedical Analysis, 274, Article 117392. Advance online publication. https://doi.org/10.1016/j.jpba.2026.117392

Birmpili, A., Heeren, R. M. A., Vreeken, R. J., & Cuypers, E. (2026). From Optical to Molecular Imaging on Human Skin: A Review. Chemical & biomedical imaging, 4(1), 13-43. https://doi.org/10.1021/cbmi.5c00066

Bartels, B., Güngör, E., Smith, D. F., Schluepmann, H., Heeren, R. M. A., & Ellis, S. R. (2026). Mass Spectrometry Imaging of Plant Metabolites Enhanced by Laser Postionization Combined with Matrix-Free Ultraviolet Laser Desorption/Ionization. Analysis & Sensing, 6(1), Article e202500225. https://doi.org/10.1002/anse.202500225

Koutrouli, M., Finotello, F., Schoof, E. M., Roussos, P., Theis, F. J., Marioni, J. C., Huber, W., Saka, S. K., Coscia, F., Mann, M., Cuypers, E., Puelles, V. G., Petrosius, V., Gaifas, L., Heeren, R. M. A., Hoffman, G. E., FNU, P., Rose, C. M., Leote, C., ... scverse Proteomics Consortium (2026). Unpaired data as a first-order challenge in single-cell and spatial proteomics. Nature Biotechnology. Advance online publication. https://doi.org/10.1038/s41587-026-03074-8