Former members
Former PhD candidates
- Upcoming PhD defence: drs. Denise Slenter; Thesis: Symphonies of Metabolomics: Utilizing graphs as sheet music to orchestrate biochemical interactions relevant in health and disease.
- Dr. Marvin Martens; Thesis: Adverse outcome pathways coming to life: exploring new ways to support risk assessments. doi: 10.26481/dis.20240129mm
- Dr. Andra Waagmeester; Thesis: Biological Pathway Abstractions: From Two-Dimensional Drawings to Multidimensional Linked Data. doi: 10.26481/dis.20240116aw
- Dr. Ryan Miller; Thesis: Pathway connections: connectivity of pathway elements and their directions in biological molecular pathway diagrams. doi: 10.26481/dis.20221206rm
- Dr. Amadeo Munoz Garcia; Thesis: Immunometabolic effects of vitamin D unravelled by an integrative systems biology analysis: A collaborative bioinformatics and laboratory approach. doi: 10.26481/dis.20200825ag
- Dr. Elisa Cirillo; Thesis: Genetic variations in connection: understanding the effects of Single Nucleotide Polymorphisms in their biological context. doi: 10.26481/dis.20190118ec
- Dr. Anwesha Bohler; Thesis: Towards the complete picture: combining modelling and experimental data in a systems biology approach. doi: 10.26481/dis.20170216abd
- Dr. Martina Kutmon; Thesis: Managing biological data in pathways and networks. doi: 10.26481/dis.20150122mk
- Dr. Michiel Adriaens; Thesis: Understanding regulation of gene transcription through epigenomics and cistromics : unfolding ones and zeros into (un)folding chromatin. Link
- Dr. Thomas Kelder; Thesis: Exploratory pathway analysis. Link
- Dr. Martijn van Iersel; Thesis: Data integration with biological pathways. Link
Former members
- Helena Basaric (Scientific programmer)
- Serena Bonaretti (Postdoc)
Duygu Dede Sener (Postdoc)
- Lauren Dupuis (Postdoc)
- Chris Evelo (Prof.)
- Iris Hollands (support staff)
- Finterly Hu (Scientific programmer)
- Mirella Kalafti (PhD candidate)
- Jonathan Melius (Scientific programmer)
- Hélder Monteiro (PhD candidate)
- Cristian R. Munteanu (Postdoc)
- Nuno Nunes (Technical staff)
- Linda Rieswijk (Postdoc)
- Woosub Shin (PhD candidate)
- Laurent Winckers (PhD candidate)
- Nhung Pham (Postdoc)
- Bart Smeets (PhD candidate)
- Martina Summer-Kutmon (Assistant Prof.)
- Lucas Giovanni (Scientific programmer)