Dr Egon Willighagen (E.L.)

Slenter, D., Kutmon, M., Evelo, C. T., & Willighagen, E. L. (2024). Discovering life's directed metabolic (sub)paths to interpret human biochemical markers using the DSMN tool. Digital Discovery, 3(1), 81-98. https://doi.org/10.1039/d3dd00069a

Murugadoss, S., Vinkovic Vrcek, I., Schaffert, A., Paparella, M., Pem, B., Sosnowska, A., Stepnik, M., Martens, M., Willighagen, E. L., Puzyn, T., Roxana Cimpan, M., Lemaire, F., Mertens, B., Dusinska, M., Fessard, V., & Hoet, P. H. (2024). Linking nanomaterial-induced mitochondrial dysfunction to existing adverse outcome pathways for chemicals. ALTEX, 41(1), 76-90. https://doi.org/10.14573/altex.2305011

Agrawal, A., Balci, H., Hanspers, K., Coort, S. L., Martens, M., Slenter, D. N., Ehrhart, F., Digles, D., Waagmeester, A., Wassink, I., Abbassi-Daloii, T., Lopes, E. N., Iyer, A., Acosta, J. M., Willighagen, L. G., Nishida, K., Riutta, A., Basaric, H., Evelo, C. T., ... Pico, A. R. (2024). WikiPathways 2024: next generation pathway database. Nucleic acids research, 52(D1), D679–D689. https://doi.org/10.1093/nar/gkad960

Hosseini beghaeiraveri, S. A., Labra gayo, J. E., Waagmeester, A., Ammar, A., Gonzalez, C., Slenter, D., Ul-Hasan, S., Willighagen, E., Mcneill, F., Gray, A. J. G., Kaffee, L.-A. (Ed.), Razniewski, S. (Ed.), & Vougiouklis, P. (Ed.) (2023). Wikidata subsetting: Approaches, tools, and evaluation. Semantic web, 1-27. Advance online publication. https://doi.org/10.3233/SW-233491

Waagmeester, A., Willighagen, E. L., Su, A. I., Kutmon, M., Gayo, J. E. L., Fernández-Álvarez, D., Groom, Q., Schaap, P. J., Verhagen, L. M., & Koehorst, J. J. (2023). Author Correction: A protocol for adding knowledge to Wikidata. Bmc Biology, 21(1), Article 261. https://doi.org/10.1186/s12915-023-01764-2

Maier, D., Exner, T. E., Papadiamantis, A. G., Ammar, A., Tsoumanis, A., Doganis, P., Rouse, I., Slater, L. T., Gkoutos, G. V., Jeliazkova, N., Ilgenfritz, H., Ziegler, M., Gerhard, B., Kopetsky, S., Joshi, D., Walker, L., Svendsen, C., Sarimveis, H., Lobaskin, V., ... Lynch, I. (2023). Harmonising knowledge for safer materials via the "NanoCommons" Knowledge Base. Frontiers in Physics, 11, Article 1271842. https://doi.org/10.3389/fphy.2023.1271842

Mullowney, M. W., Duncan, K. R., Elsayed, S. S., Garg, N., van der Hooft, J. J. J., Martin, N. I., Meijer, D., Terlouw, B. R., Biermann, F., Blin, K., Durairaj, J., Gorostiola González, M., Helfrich, E. J. N., Huber, F., Leopold-Messer, S., Rajan, K., de Rond, T., van Santen, J. A., Sorokina, M., ... van Westen, G. J. P. (2023). Artificial intelligence for natural product drug discovery. Nature Reviews Drug Discovery, 22(11), 895–916. https://doi.org/10.1038/s41573-023-00774-7

Martens, M., Stierum, R., Schymanski, E. L., Evelo, C. T., Aalizadeh, R., Aladjov, H., Arturi, K., Audouze, K., Babica, P., Berka, K., Bessems, J., Blaha, L., Bolton, E. E., Cases, M., Damalas, D. ., Dave, K., Dilger, M., Exner, T., Geerke, D. P., ... Et al. (2023). ELIXIR and Toxicology: a community in development. F1000Research, 10(1), Article 1129. https://doi.org/10.12688/f1000research.74502.2

Dumit, V. I., Ammar, A., Bakker, M. I., Bañares, M. A., Bossa, C., Costa, A., Cowie, H., Drobne, D., Exner, T. E., Farcal, L., Friedrichs, S., Furxhi, I., Grafström, R., Haase, A., Himly, M., Jeliazkova, N., Lynch, I., Maier, D., Noorlander, C. W., ... Nymark, P. (2023). From principles to reality. FAIR implementation in the nanosafety community. Nano Today, 51(1), Article 101923. https://doi.org/10.1016/j.nantod.2023.101923

Furxhi, I., Willighagen, E., Evelo, C., Costa, A., Gardini, D., & Ammar, A. (2023). A data reusability assessment in the nanosafety domain based on the NSDRA framework followed by an exploratory quantitative structure activity relationships (QSAR) modeling targeting cellular viability. NanoImpact, 31(1), Article 100475. https://doi.org/10.1016/j.impact.2023.100475