A.M.F. Carlier

Swapnasrita, S., de Vries, J. C., Stachowska-Pietka, J., Öberg, C. M., Gerritsen, K. G. F., & Carlier, A. (2025). Comparing Computational Peritoneal Dialysis Models in Pigs and Patients. Toxins, 17(7), Article 329. https://doi.org/10.3390/toxins17070329

Romero, M., Luckett, J., Dubern, J.-F., Figueredo, G. P., Ison, E., Carabelli, A. M., Scurr, D. J., Hook, A. L., Kammerling, L., da Silva, A. C., Xue, X., Blackburn, C., Carlier, A., Vasilevich, A., Sudarsanam, P. K., Vermeulen, S., Winkler, D. A., Ghaemmaghami, A. M., Boer, J. D., ... Williams, P. (2025). Combinatorial discovery of microtopographical landscapes that resist biofilm formation through quorum sensing mediated autolubrication. Nature Communications, 16(1), Article 5295. https://doi.org/10.1038/s41467-025-60567-x

Swapnasrita, S., de Vries, J. C., Öberg, C. M., Carlier, A. M. F., & Gerritsen, K. G. F. (2025). Computational modeling of peritoneal dialysis: An overview. Mathematical Biosciences and Engineering, 22(2), 431-476. https://doi.org/10.3934/mbe.2025017

Marradi, M., van Griensven, M., Beijer, N. R. M., de Boer, J., & Carlier, A. (2025). Towards predicting implant-induced fibrosis: A standardized network model of macrophage-fibroblast interactions. Computational and Structural Biotechnology Journal, 27, 3251-3263. https://doi.org/10.1016/j.csbj.2025.07.022

Veser, C., Carlier, A., Dubois, V., Mihaila, S. M., & Swapnasrita, S. (2024). Embracing sex-specific differences in engineered kidney models for enhanced biological understanding of kidney function. Biology of Sex Differences, 15(1), Article 99. https://doi.org/10.1186/s13293-024-00662-8

Jafarinia, H., Shi, L., Wolfenson, H., & Carlier, A. (2024). YAP phosphorylation within integrin adhesions: insights from a computational model. Biophysical Journal, 123(21), 3658-3668. https://doi.org/10.1016/j.bpj.2024.09.002

Jafarinia, H., Khalilimeybodi, A., Barrasa-Fano, J., Fraley, S. I., Rangamani, P., & Carlier, A. (2024). Insights gained from computational modeling of YAP/TAZ signaling for cellular mechanotransduction. NPJ systems biology and applications, 10(1), Article 90. https://doi.org/10.1038/s41540-024-00414-9

Donders, Z., Skorupska, I. J., Willems, E., Mussen, F., Broeckhoven, J. V., Carlier, A., Schepers, M., & Vanmierlo, T. (2024). Beyond PDE4 inhibition: A comprehensive review on downstream cAMP signaling in the central nervous system. Biomedicine & Pharmacotherapy, 177, Article 117009. https://doi.org/10.1016/j.biopha.2024.117009

Shi, L., Nadjar-Boger, E., Jafarinia, H., Carlier, A., & Wolfenson, H. (2024). YAP mediates apoptosis through failed integrin adhesion reinforcement. Cell Reports, 43(3), Article 113811. https://doi.org/10.1016/j.celrep.2024.113811

Honasoge, K. S., Karagöz, Z., Goult, B. T., Wolfenson, H., LaPointe, V. L. S., & Carlier, A. (2023). Force-dependent focal adhesion assembly and disassembly: A computational study. PLoS Computational Biology, 19(10), Article e1011500. https://doi.org/10.1371/journal.pcbi.1011500